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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6741788 chr2:132242465 A/T TUBA3E chr2:130949316-130956034:- 0.54 6.28 7.78E-10 Box Plot
THCA rs67439322 chr14:39851621 G/T LOC647288 chr13:75811890-75814517:- -0.52 -9.69 2.09E-20 Box Plot
THCA rs67440596 chr14:39782091 TTG/T LOC647288 chr13:75811890-75814517:- 0.59 6.28 7.74E-10 Box Plot
THCA rs6745117 chr2:101133342 T/C LOC285359 chr3:101431278-101432259:+ 0.35 6.73 4.91E-11 Box Plot
THCA rs67454850 chr5:43658457 TA/T UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs67457459 chr6:27198343 T/G ZFP57 chr6:29640169-29648887:- 0.6 6.4 3.79E-10 Box Plot
THCA rs6745928 chr2:114146870 G/C CBWD1 chr9:121038-179147:- -0.33 -5.95 5.09E-9 Box Plot
THCA rs6746622 chr2:101179122 T/G LOC285359 chr3:101431278-101432259:+ 0.51 12.04 2.48E-29 Box Plot
THCA rs6747613 chr2:101180138 A/G LOC285359 chr3:101431278-101432259:+ 0.57 13.77 1.36E-36 Box Plot
THCA rs6747630 chr2:101134699 C/T LOC285359 chr3:101431278-101432259:+ 0.34 6.5 1.99E-10 Box Plot
THCA rs6747639 chr2:112967458 C/T RGPD5 chr2:110550335-110615272:+ -0.51 -7.14 3.49E-12 Box Plot
THCA rs6748900 chr2:101177384 G/A LOC285359 chr3:101431278-101432259:+ 0.55 13.34 9.88E-35 Box Plot
THCA rs6749230 chr2:112956220 G/A RGPD5 chr2:110550335-110615272:+ -0.52 -7.47 3.96E-13 Box Plot
THCA rs67509210 chr6:26354100 G/T RNF5P1 chr8:38458179-38458718:- 0.57 6.19 1.27E-9 Box Plot
THCA rs6751890 chr2:142398540 G/A VPS25 chr17:40925454-40931617:+ 0.21 5.96 4.86E-9 Box Plot